

Dr. Lenore J. Cowen is an Associate Professor in the Computer Science Department at Tufts University. She also has a courtesy appointment in the Tufts Mathematics Department. She received a BA in Mathematics from Yale and a Ph.D. in Mathematics from MIT. After finishing her Ph.D. in 1993, she was an NSF Postdoctoral Fellow and then joined the faculty of the Mathematical Sciences department at Johns Hopkins University where she was promoted to the rank of Associate Professor in 2000. Lured by the Boston area, and the prospect of making an impact in a growing young department, she joined Tufts in September, 2001. Dr. Cowen has been named an ONR Young Investigator and a fellow of the Radcliffe Institute for Advanced Study. Her research interests span three areas: Discrete Mathematics (since high school), Algorithms (since 1991 in graduate school) and Computational Molecular Biology (since 2000). She is on the editorial boards of the SIAM Journal on Discrete Mathematics and of SIAM Review.

US Mail: Email: cowen at cs.tufts.edu CS Department Tufts University Phone: +1-617-627-5134 161 College Avenue Medford, MA 02155 Fax: +1-617-627-3220 U.S.A.
New 12/13/06: confirmation that some email is getting eaten by CS department spam filters. While this is being worked on, if you didn't hear back from me, PLEASE try my alternate email address.
You can also reach me at firstname.lastname at gmail.com

Spring 2008 I am teaching Algorithms.
Fall 2007 I am teaching one of my favorite courses: Graph Theory.
Please note that the course links below point to the course web page for the *current* semester at Tufts, i.e. if it's a previous year, and I wasn't the last to teach it, you are going to be looking at the homepage for someone else's version of the class.
In Fall 2006, I taught Algorithms and an advanced topics seminar in Computational Biology.
In Spring 2006 I taught an introductory course in Cryptography
In Fall 2005 I taught Combinatorial Optimization
In Fall 2004 I taught Computational Biology (I also co-taught this class in Fall of 2002. )
Spring 2004 and Spring 2002 I taught an Advanced Algorithms class. Here's a little blurb.
Spring 2003 and Spring 2005 I taught and co-taught Theory of Computing
Fall 2002 I taught: Cryptography and Security and
Fall 2001 I taught COMP 15: Data Structures in C++.
Here are the classnotes for two of the graduate courses I taught at Hopkins: Approximation Algorithms and The Probabilistic Method.

First is this really the page you are looking for? Perhaps you are more interested in my compbio research. In which case you should go directly to my Computational Biology Group homepage.
Othewise, I would say that my research interests are
probably far too broad for my
own good. I have inherited my advisor's love of good
problems, wherever they be found.
Exploiting locality and approximate distance have been persistent themes,
even across catagories, for example they have been used in our approach both
to routing and to classification and clustering problems. Now I am finding that my work on networks and graph algorithms may have some interesting synergies with computational biology and functional genomics. Research interests include:
My research in approximate routing is funded by NSF grant CCR0208629 and portions of my computational biology research are currently being funded by Large ITR grant with me as the Tufts PI and Simon Kasif of BU as the main PI.
My Ph.D. advisor was Daniel J. Kleitman ; my Ph.D. students to date were Christine Cheng (JHU/1999), 1/2 Christopher Wagner (JHU/1999), and Adam Cannon (JHU/2000). My current PhD students are Arthur Brady (Tufts/expected 2008), Guangtao Ge (Tufts) and Anoop Kumar. A fairly complete list of co-authors can be found here (My Erdos number is 2 (but so is everyone else's)).

BetaWrapPro Also see Andrew McDonnell's masters thesis
Wrap and Pack: Predicting Beta Trefoils by Comparative Modeling
DIGG: Dynamic Internet Graph Generation (Under construction)
High-Dimentional Data Analysis for an Artificial Nose
CAMDA: High-Dimensional Microarray Data Analysis And an earlier paper at this location.

Conference co-chair, SIAM 2008 Annual Meeting
Editorial Board member, SIAM Journal on Discrete Mathematics
Editorial Board member, SIAM Review
From 2006-2008 I was Vice-Chair of SIAM's SIAG on Discrete Mathematics, and from 2000-2008 I was SIAM representative on the Steering Committee for the ACM-SIAM Symposium for Discrete Algorithms (SODA).
Special Issue of the journal Discrete Mathematics in honor of Daniel
J. Kleitman's 65th Birthday.
JCSS, Special Issue of "Best Papers in STOC 1999 ."
PC Committees: STOC 1999 , Latin 2002 , ALICE 2003 (chair) , SODA 2004, , DISC 2005, SODA 2008, ICALP 2008.
Current students at Tufts:
Current PhD students: Arthur Brady , Anoop Kumar , Guangtao Ge PAPERS IN GRAPH THEORY
HIGH DIMENSIONAL DATA
STRUCTURES
COMPUTATIONAL BIOLOGY AND CHEMISTRY
this is a duplication of some of the information that is now located
on my Computational Biology Homepage.
A Few Recent Talks

Comparative Modeling of Mainly-Beta Protein Structures (A talk for a Computer Science Audience with no biology background)
Full Curriculum Vitae

Editorial

Students

Undergraduate Research Advisees, Past and Present: Alana Fu, Kyle Maxwell , Emily Mower ,
Nathan Palmer , Patrick Schmid , Jeremy Tyler, Daniel Wolchonok.
Current Masters students: Chris Palmer, Yang Wang, Wanyu Wang.
For a list of past Masters students click here.
Graduated Ph.D. students:
Christine Cheng
(JHU/1999)
Christopher Wagner (JHU/1999) (co-advised with Mike Goodrich)
Adam Cannon (JHU/2000).

Discrete Math links
Graph Theory
White Pages by Daniel P. Sanders
Another Guide to Graph Theorists by Jörg Zuther
Graph
Theory Resources Page by Thomas Emden-Weinert
Home Pages of Combinatorial People and Groups at the EJC
Pages in
Honor of the Late Paul Erdos from The
Erdos Number Project
The
On-Line Encyclopedia of Integer Sequences by Neil
J. A. Sloane
High School Math Camps
The American Mathematics Society is now giving out grants
to high school math camps!! They are currently raising endowment
to support it, they are having real mathematicians judging the programs,
they are charging 0 overhead to administer
the program, and basically, I can't think of a better "bang"
for your buck than supporting this, so check out their application process and
give them money!!
As part of their effort, they are also (orthogonal to this) providing a central website where you can read about all the math camps (whether they applied for an AMS grant or not) -- so if you know a bright high school student, point them at this Information about High School Math Camps Site (I myself an alum of the Hampshire College Summer Studies in Math program, and I recommend it very highly!!)
Interesting and Fun Links
Long Now
Take Jim Propp's Self-Referential Aptitute Test!
User Friendly
Ladle Rat Rotten Hut
More fun links on my personal home page
Important note! If I ever die or become permanently disabled or go anywhere where I can't take this content with me and put it up publically, it is a strong wish of mine that a static archive at the time of my death
of everything web accessible under the ~cowen hierarchy be stored in a public archive at