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SO: you want to get your PhD in Computer Science and Study Bioinformatics and Computational Biology
Consider coming to Tufts University! You can read all about the group that
Profs. Slonim and Cowen co-direct
at http://bcb.cs.tufts.edu
Below, we have more information about other programs, mostly for our own undergraduate and masters students, but feel free to use it if you are not at Tufts and it will also help you.
There are many ways to go do Bioinformatics and Computational
Biology. There are programs in Biology departments, Biomedical
Engineering departments, Computer Science departments, Mathematics
Departments, not to mention Medical Schools. There are also some
places that offer Masters or Doctoral degrees directly in a special
interdisciplinary program for Bioinformatics and/or Computational
Biology: see
http://www.iscb.org/iscb-degree-certificate-programs at www.iscb.org for a nice long listing
of such programs. Whether it's better to get a PhD in a traditional
department or in an interdisciplinary program depends on your
background and interests. It really depends on two things: one is, if
you have the background and interest to do well in the courses
required in the program (for example, usually, if you enter a CS
department, you are expected to have at least an undergraduate
background in CS and be able to program; if you enter a biology
department, you are expected to have spent some time as an undergrad
in a wet lab). The second is, since your graduate school experience is so dependent on your research advisor, what is the "home" department of the research advisor you are most excited about working with.
Having said all that, the purpose of this page is to list,
specifically, recommended Computer Science
departments (along with their recommended faculty) in North America
where you can work in Computational Biology or
Bioinformatics.
Deparments and Faculty
- Brown University (Faculty: Sorin Istrail, Ben Raphael )
- CMU (Faculty: Ziv Bar-Joseph, Dannie Durand, Chris Langmead, Russell Schwartz, Eric Xing )
- Columbia University (Faculty: Itsik Pe'er, and in Biology, Dana Pe'er )
- Cornell University (Faculty: Uri Keich, Jon Kleinberg, Adam Siepel )
- Dartmouth University (Faculty: Chris Bailey-Kellogg )
- MIT (Faculty: Bonnie Berger (also in Mathematics), Manolis Kellis )
- McGill University (Faculty: Mathieu Blanchette )
- Princeton University (Faculty: Mona Singh )
- Rice University (Faculty: Luay Nakhleh )
- Stanford University (Faculty: Serafim Batzoglou, Daphne Koller )
- Simon Fraser University (Faculty: Cenk Sahinalp )
- Tufts University (Faculty: Lenore Cowen, Donna Slonim )
- University of Arizona (Faculty: John Kececioglu )
- University of British Columbia (Faculty: Anne Condon )
- UC Berkeley (Faculty: Dick Karp and in Math, Lior Pachter )
- UC Davis (Faculty: Dan Gusfield )
- UCLA (Faculty: Eleazer Eskin )
- UC Riverside (Faculty: Tao Jiang )
- UC San Diego (Faculty: Vineet Bafna, Pavel Pevzner )
- UC Santa Cruz (Faculty: David Haussler, Kevin Karplus )
- University of Maryland (Faculty: Carl Kingsford, Mihai Pop, Steven Salzberg )
- UT Austin (Faculty: Tandy Warnow )
- U Toronto (Faculty: Michael Brudno )
- University of Washington (Faculty: Martin Tompa )
- University of Waterloo (Faculty: Dan Brown, Ming Li )
- WashU St. Louis (Faculty: Michael Brent )
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