Fall 2005 Course Descriptions

COMP 150-GEN Special Topics: Genomic Sequence Algorithms

A. Blumer
MW 5:30p-6:45p, Halligan Hall 102
N+ Block

This is a course for students who have taken COMP 150-BIO who would like a more in-depth look at the algorithms used to analyze genomic sequences. Topics will be selected from string matching, multiple alignments, suffix trees, Hidden Markov Models, evolutionary trees, etc. Main Text: Algorithms on Strings, Trees and Sequences by Dan Gusfield, 1997, Cambridge University Press.

Prerequisite: COMP 150-BIO. COMP 160 may be helpful as well.


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